PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Dr02951.1

Organism

Dioscorea rotundata

Taxonomic ID

55577

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea

Family

MYB_related

Protein Properties

Length: 870aa MW: 97427.9 Da PI: 5.467

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Dr02951.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	25.6	2.8e-08	804	860	1	48
TSSS-HHHHHHHHHHHHHTTTT.....-HHHHHHHHT....TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.....tWktIartmg....kgRtlkqcksrwqkyl 48 r+ WT+eE+e+l+ av+++ ++ W++I k+R + ++k++w++ + Dr02951.1 804 RLHWTAEEEEILKTAVQKFANDgertlPWTKILDFGRhifhKTRQPGDLKDKWRNIR 860 789****************************9988999************975 PP

Sequence ? help Back to Top
Protein Sequence Length: 870 aa Download sequence
MPSDELSDHG AGLTSDSGEL LPWLWSIETL AEENWCDASI VQACIDRVPN FWDKASDCIK 60 EKVILRYLRE LLNSGAFGSS QFLPLDSDSR EVENVPSSEV LCRLLRKASS LCNSTKGMDK 120 GKERSRGHWR GKDLRRYIRR KSSDLPRSSL DLLKNCSVEG HSKLLLSLKE SSSSGRLNEA 180 NNQVCDIGAE QEIEIQMPKM KKPNSAADPA NLVTEEDSTR SRQHLPVLNC MDSDRREQSH 240 RNIGGNGCEN VELSRHDSLP QISSKEKSGP QQDSNPPLHE QSHFDGDQIV CVETGNDDDA 300 DGYRVVPTNP GVNADKAARI YVDLDSMADD WTEKNLCVKC NKNGPMFNCS DNSCLMAVHE 360 KCLGTSPYFD ERGFYYCPPC SYKITTTAYR KAKLTMLRAR EALSAFLSKD SIQDKLKGTV 420 SVGVPREVNQ PGVTVDLEKG EASKVSCEGD KGDVSCADLI FRRSGYETVN DHIESMQLQS 480 HNATVTHAAE NDGVNCIREE RDVPQKGFVV EKGEASKVSY DGDKGDIFCT DLVLRRSGCK 540 TANDHVEFMQ LQIHNATVTH AAESDGMDCS NEERDVPHKG FVVEENHHGS KQLQPHNAIV 600 TPTADNDDTN CNNEEMVVPQ EGLVVEENHH GSKQLQFHNA IVTPTIADAD TNYINEERDV 660 PHESFVAEEN QHSEPDADND SRNLHCHDLN SVQTRNEHGS VAVEGKQHNE DNGDTVNMLR 720 DNEPPETIMN FHTENTTDPG SLVLPTSGNH AKRRKLDLEM ENHTPRVPAI AKEEKKLSSD 780 NANKRQTQNK RYSNPIVSLG RRTRLHWTAE EEEILKTAVQ KFANDGERTL PWTKILDFGR 840 HIFHKTRQPG DLKDKWRNIR NKEASKGMER

Sequence ? help Back to Top

Protein Sequence Length: 870 aa Download sequence

MPSDELSDHG AGLTSDSGEL LPWLWSIETL AEENWCDASI VQACIDRVPN FWDKASDCIK  60
EKVILRYLRE LLNSGAFGSS QFLPLDSDSR EVENVPSSEV LCRLLRKASS LCNSTKGMDK  120
GKERSRGHWR GKDLRRYIRR KSSDLPRSSL DLLKNCSVEG HSKLLLSLKE SSSSGRLNEA  180
NNQVCDIGAE QEIEIQMPKM KKPNSAADPA NLVTEEDSTR SRQHLPVLNC MDSDRREQSH  240
RNIGGNGCEN VELSRHDSLP QISSKEKSGP QQDSNPPLHE QSHFDGDQIV CVETGNDDDA  300
DGYRVVPTNP GVNADKAARI YVDLDSMADD WTEKNLCVKC NKNGPMFNCS DNSCLMAVHE  360
KCLGTSPYFD ERGFYYCPPC SYKITTTAYR KAKLTMLRAR EALSAFLSKD SIQDKLKGTV  420
SVGVPREVNQ PGVTVDLEKG EASKVSCEGD KGDVSCADLI FRRSGYETVN DHIESMQLQS  480
HNATVTHAAE NDGVNCIREE RDVPQKGFVV EKGEASKVSY DGDKGDIFCT DLVLRRSGCK  540
TANDHVEFMQ LQIHNATVTH AAESDGMDCS NEERDVPHKG FVVEENHHGS KQLQPHNAIV  600
TPTADNDDTN CNNEEMVVPQ EGLVVEENHH GSKQLQFHNA IVTPTIADAD TNYINEERDV  660
PHESFVAEEN QHSEPDADND SRNLHCHDLN SVQTRNEHGS VAVEGKQHNE DNGDTVNMLR  720
DNEPPETIMN FHTENTTDPG SLVLPTSGNH AKRRKLDLEM ENHTPRVPAI AKEEKKLSSD  780
NANKRQTQNK RYSNPIVSLG RRTRLHWTAE EEEILKTAVQ KFANDGERTL PWTKILDFGR  840
HIFHKTRQPG DLKDKWRNIR NKEASKGMER

Link Out ? help Back to Top
Ensembl	Dr02951.1