PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dr02553.1
Organism
Dioscorea rotundata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
Family ERF
Protein Properties Length: 157aa    MW: 17863 Da    PI: 4.9914
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dr02553.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2224.1e-075592748
        AP2  7 rwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaia 48
               r+++  gr++ eIr ps+   +k ++lg+f+t++e a a++ 
  Dr02553.1 55 RRRP-CGRYAKEIRNPST---KKGHWLGTFDTPKEVALAYDM 92
               5667.7999999999855...5******************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 157 aa     Download sequence    
MEKNPVDGRV DGLVESSLLV VQGFPHPAVN NALLQYFATV SVLNSFLNPY FHRGRRRPCG  60
RYAKEIRNPS TKKGHWLGTF DTPKEVALAY DMSSITFRGI DKAQTNFCYE FLTMPSPPPP  120
PLPQSPLPSE KEKEYYYESN LEINDDHDHL VDSDDDD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G13910.13e-19ERF family protein