PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Dr02491.1

Organism

Dioscorea rotundata

Taxonomic ID

55577

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea

Family

HSF

Protein Properties

Length: 459aa MW: 51752.3 Da PI: 5.3427

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Dr02491.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	107.3	1.2e-33	20	110	2	101
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellekik 98 Fl k+y++++d+++++++sws++ sfvv+++ ef+ ++Lp +Fkh+nf+SF+RQLn+YgF+k++ e+ weF++++F +g+k+ll++i+ Dr02491.1 20 FLIKTYDMIDDSSTDDIVSWSSSHASFVVWNPPEFSARLLPLFFKHNNFSSFIRQLNTYGFRKIHPER---------WEFANEEFIQGQKHLLKNIH 107 9**************************************************************999.........****************** PP XXX CS HSF_DNA-bind 99 rkk 101 r+k Dr02491.1 108 RRK 110 *98 PP

Sequence ? help Back to Top
Protein Sequence Length: 459 aa Download sequence
MESAAAAATS GSAGGGPAPF LIKTYDMIDD SSTDDIVSWS SSHASFVVWN PPEFSARLLP 60 LFFKHNNFSS FIRQLNTYGF RKIHPERWEF ANEEFIQGQK HLLKNIHRRK PIHSHSHTPD 120 QERAALEEEI DRLSREKTAL QADLCRFRQQ QPGMKSQLDG LDQRLHDMEQ RQEKMISFIQ 180 RAIQNPTFME TLVKMAVAGS MDFSAIHKKR RLPNDNSYYD DHSTTSKNEV VGHVFHRYFS 240 DKLKLELSPA ISDCNLVSAC THSSNEDQES PVQHEKVMIE GLPLVPETVE LSDTGTSFCS 300 RKSVLFSSTV EDGDGLMPCH LNLTLASSSM QVDSNQFPSR TMSLEEHSAG NGSVLRMSNE 360 ERDEGFSREI RKNQDNLGDS GENQQSNNHA PAAPPALAAT GRVNDVFWEQ FLTERPGSSE 420 VEEASSNART NPSEEQLEER SPRNESMWKS TKDMEQLTL

Sequence ? help Back to Top

Protein Sequence Length: 459 aa Download sequence

MESAAAAATS GSAGGGPAPF LIKTYDMIDD SSTDDIVSWS SSHASFVVWN PPEFSARLLP  60
LFFKHNNFSS FIRQLNTYGF RKIHPERWEF ANEEFIQGQK HLLKNIHRRK PIHSHSHTPD  120
QERAALEEEI DRLSREKTAL QADLCRFRQQ QPGMKSQLDG LDQRLHDMEQ RQEKMISFIQ  180
RAIQNPTFME TLVKMAVAGS MDFSAIHKKR RLPNDNSYYD DHSTTSKNEV VGHVFHRYFS  240
DKLKLELSPA ISDCNLVSAC THSSNEDQES PVQHEKVMIE GLPLVPETVE LSDTGTSFCS  300
RKSVLFSSTV EDGDGLMPCH LNLTLASSSM QVDSNQFPSR TMSLEEHSAG NGSVLRMSNE  360
ERDEGFSREI RKNQDNLGDS GENQQSNNHA PAAPPALAAT GRVNDVFWEQ FLTERPGSSE  420
VEEASSNART NPSEEQLEER SPRNESMWKS TKDMEQLTL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G13980.1	1e-119	HSF family protein

Link Out ? help Back to Top
Ensembl	Dr02491.1