PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Dr02378.1

Organism

Dioscorea rotundata

Taxonomic ID

55577

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea

Family

Dof

Protein Properties

Length: 1153aa MW: 127363 Da PI: 6.4634

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Dr02378.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	123.3	8.2e-39	905	965	2	62
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 +e+alkcprCdstntkfCy+nnysl+qPr+fCk+CrryWt+GGalrnvPvGgg+r+nk+s+ Dr02378.1 905 PEQALKCPRCDSTNTKFCYFNNYSLTQPRHFCKTCRRYWTRGGALRNVPVGGGCRRNKRSK 965 7899******************************************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 1153 aa Download sequence
MLNKPVEFDS NGTDYGADMN DSHSVKIILL QKQLGRKSDM SVVHDFKVLS SNVDAFIYER 60 TNNPNDKNCI VSKGYDATIH FESTVQEPRR DWMKKMRALN SLGIGLSLVF GCLLLALVAE 120 LYYLLWWKKR FSNRDLEADH YXSPAKEIFC LFCWKRPSSL SSTALNPQAM NSSAVDDDHN 180 HGHQLHLHSN SGKDHLLKSF DSEEGLESEL MRIHNLQGPP RFLFTIKEET KEDLESEDGK 240 SKGGRSRRGS KGRSLSDVLF PVETPFLTPL SSPPFFTPPL TPLSYYYNQH GLNPLFESSK 300 QDDFNSLRSS SPPPKFKFLK DAEEKLYRKT LMEEALKVHR NNGEEEDEDD DEVGLVXVLP 360 WVNTIXNFIY KTSINRQATK DAGVIAGLNV MRIINEPTAA AIAYGLDKKS SSSGEKNVLI 420 FDLGGGTFDV SLLTIEEGIF EVKATAGDTH LGGEDFDNRM VNHFVQEFKR KHKKDISGNP 480 RALRRLRTSC ERAKRTLSST AQTTIEIDSL YEGIDFYTTI TRARFEELNM DLFRKCMEPV 540 EKCLRDAKMD KSTVHDVVLV GGSTRIPKVQ QLLQDFFNGK ELCKSINPDE AVAYGAAVQA 600 AILSGEGNEK VQDLLLLDVT PLSLGLETAG GVMTVLIPRN TTIPTKKEQV FSTYSDNQPG 660 VLIQVYEGER TRTRDNNLLG KFELSGIPPA PRGVPQITVC FDIDANGILN VSAEDKTTGQ 720 KNKITITNDK GRLSKEEIEK MVQDAEKYKS EDEEHKKKVE SKNALENYAY NMRNTIKDDK 780 IASKLDSADK KKIEDAIDGA IQWLDSNQLA EADEFDDKMK ELEGICNPII AKMYQGAGAD 840 MAGGMDEDGP SAAGAGGAGP KIEEEQVGHQ PVHRNGDGDH PNQTTNTHRP GSMAERARLA 900 KLPQPEQALK CPRCDSTNTK FCYFNNYSLT QPRHFCKTCR RYWTRGGALR NVPVGGGCRR 960 NKRSKASGSS SKSSSSLSSS AAVSTSTVAA XMQSHATVPP QLPPFMASLH SLPDYGAAAN 1020 LGLNFTGMQT MDHNHAAHEY QATGIQHMPQ LPFLGGLESP VPMSVPGLFP FEGFSGEVHQ 1080 KQSNSGMITQ LASXKMEENS LARLSLQRQF LSLPGSDQYW NGAAGGGSTS IGNSGWASDL 1140 PGFNSSTNGS SVL

Sequence ? help Back to Top

Protein Sequence Length: 1153 aa Download sequence

MLNKPVEFDS NGTDYGADMN DSHSVKIILL QKQLGRKSDM SVVHDFKVLS SNVDAFIYER  60
TNNPNDKNCI VSKGYDATIH FESTVQEPRR DWMKKMRALN SLGIGLSLVF GCLLLALVAE  120
LYYLLWWKKR FSNRDLEADH YXSPAKEIFC LFCWKRPSSL SSTALNPQAM NSSAVDDDHN  180
HGHQLHLHSN SGKDHLLKSF DSEEGLESEL MRIHNLQGPP RFLFTIKEET KEDLESEDGK  240
SKGGRSRRGS KGRSLSDVLF PVETPFLTPL SSPPFFTPPL TPLSYYYNQH GLNPLFESSK  300
QDDFNSLRSS SPPPKFKFLK DAEEKLYRKT LMEEALKVHR NNGEEEDEDD DEVGLVXVLP  360
WVNTIXNFIY KTSINRQATK DAGVIAGLNV MRIINEPTAA AIAYGLDKKS SSSGEKNVLI  420
FDLGGGTFDV SLLTIEEGIF EVKATAGDTH LGGEDFDNRM VNHFVQEFKR KHKKDISGNP  480
RALRRLRTSC ERAKRTLSST AQTTIEIDSL YEGIDFYTTI TRARFEELNM DLFRKCMEPV  540
EKCLRDAKMD KSTVHDVVLV GGSTRIPKVQ QLLQDFFNGK ELCKSINPDE AVAYGAAVQA  600
AILSGEGNEK VQDLLLLDVT PLSLGLETAG GVMTVLIPRN TTIPTKKEQV FSTYSDNQPG  660
VLIQVYEGER TRTRDNNLLG KFELSGIPPA PRGVPQITVC FDIDANGILN VSAEDKTTGQ  720
KNKITITNDK GRLSKEEIEK MVQDAEKYKS EDEEHKKKVE SKNALENYAY NMRNTIKDDK  780
IASKLDSADK KKIEDAIDGA IQWLDSNQLA EADEFDDKMK ELEGICNPII AKMYQGAGAD  840
MAGGMDEDGP SAAGAGGAGP KIEEEQVGHQ PVHRNGDGDH PNQTTNTHRP GSMAERARLA  900
KLPQPEQALK CPRCDSTNTK FCYFNNYSLT QPRHFCKTCR RYWTRGGALR NVPVGGGCRR  960
NKRSKASGSS SKSSSSLSSS AAVSTSTVAA XMQSHATVPP QLPPFMASLH SLPDYGAAAN  1020
LGLNFTGMQT MDHNHAAHEY QATGIQHMPQ LPFLGGLESP VPMSVPGLFP FEGFSGEVHQ  1080
KQSNSGMITQ LASXKMEENS LARLSLQRQF LSLPGSDQYW NGAAGGGSTS IGNSGWASDL  1140
PGFNSSTNGS SVL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G02460.1	4e-44	Dof family protein

Link Out ? help Back to Top
Ensembl	Dr02378.1