PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Dr02363.1

Organism

Dioscorea rotundata

Taxonomic ID

55577

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea

Family

WRKY

Protein Properties

Length: 732aa MW: 80643.3 Da PI: 8.6025

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Dr02363.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	45.6	1.4e-14	101	140	19	58
SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS CS WRKY 19 efprsYYrCtsagCpvkkkversaedpkvveitYegeHnh 58 + +sYYrCt ++C++kk+vers +dp+++++tYeg H h Dr02363.1 101 KWRKSYYRCTNPRCNAKKQVERSIDDPETLIVTYEGLHLH 140 5568**********************************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 732 aa Download sequence
MDEVSESGEE LVRELLDNES PFFVSSNAMM VDDMNRESII NKLISTVYSG PTIGDIESAL 60 SINGPRPVVS MPEKGMGKME NKYTLKIKSC GSAGLADDGY KWRKSYYRCT NPRCNAKKQV 120 ERSIDDPETL IVTYEGLHLH YAYSHILSPV PQQFPMKKTK IQINNVSELG QQLEQQQLQQ 180 QQNTAIIDVD HVMESPQGLL EDIVPLLVRK PCFSNTNTSS SSQASSPSYS SSLSCSSSSP 240 SPPIPPPLNP IQRKEEGKRI KGSPESMDSR KFRLNLPAGM EASLHIEPVP THFPLIPKLS 300 SPSKTTYSDR FIPCRSSSRL QNFGLTDKTS PVKEGGNELY SRLLRAELLG DDSAMCSPGQ 360 ASPISPNKNL FRFKTDHSGP SSPFSGVSSG QAGGGYGEVS TPPKVPRKVP KTPHKVLDAP 420 SLQDDFYLNL VDWSSQNVLA VGLGTCVYLW SATTSKVTKL CDLGPRDGVC SVQWTREGSY 480 LAIGTLLGDV QIWDSTRCKK IRTMGGRQTR TGVLTWSSRI LSSGGRDKNI LQHDIRVSSD 540 FVSKLTGHRS EICGLKWSHD DRELASGGND NQLLVWNQHS QQPVLKLIEH TAAVKAIAWS 600 PHQHGLLASG GGTADRCIRF WNTVNSNMLN FVDTGSQVCN LAWSKNVNEL VSTHGYSQNQ 660 IMVWKYPSMS KITTLTGHTL RVLYLAVSPD GQTIVTGAGD ETLRFWNVFP SMKTPTPVRE 720 TGVWSLGRTH IR

Sequence ? help Back to Top

Protein Sequence Length: 732 aa Download sequence

MDEVSESGEE LVRELLDNES PFFVSSNAMM VDDMNRESII NKLISTVYSG PTIGDIESAL  60
SINGPRPVVS MPEKGMGKME NKYTLKIKSC GSAGLADDGY KWRKSYYRCT NPRCNAKKQV  120
ERSIDDPETL IVTYEGLHLH YAYSHILSPV PQQFPMKKTK IQINNVSELG QQLEQQQLQQ  180
QQNTAIIDVD HVMESPQGLL EDIVPLLVRK PCFSNTNTSS SSQASSPSYS SSLSCSSSSP  240
SPPIPPPLNP IQRKEEGKRI KGSPESMDSR KFRLNLPAGM EASLHIEPVP THFPLIPKLS  300
SPSKTTYSDR FIPCRSSSRL QNFGLTDKTS PVKEGGNELY SRLLRAELLG DDSAMCSPGQ  360
ASPISPNKNL FRFKTDHSGP SSPFSGVSSG QAGGGYGEVS TPPKVPRKVP KTPHKVLDAP  420
SLQDDFYLNL VDWSSQNVLA VGLGTCVYLW SATTSKVTKL CDLGPRDGVC SVQWTREGSY  480
LAIGTLLGDV QIWDSTRCKK IRTMGGRQTR TGVLTWSSRI LSSGGRDKNI LQHDIRVSSD  540
FVSKLTGHRS EICGLKWSHD DRELASGGND NQLLVWNQHS QQPVLKLIEH TAAVKAIAWS  600
PHQHGLLASG GGTADRCIRF WNTVNSNMLN FVDTGSQVCN LAWSKNVNEL VSTHGYSQNQ  660
IMVWKYPSMS KITTLTGHTL RVLYLAVSPD GQTIVTGAGD ETLRFWNVFP SMKTPTPVRE  720
TGVWSLGRTH IR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G43290.1	1e-33	WRKY family protein

Link Out ? help Back to Top
Ensembl	Dr02363.1