PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Dr02312.1

Organism

Dioscorea rotundata

Taxonomic ID

55577

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea

Family

G2-like

Protein Properties

Length: 448aa MW: 49871.3 Da PI: 6.749

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Dr02312.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	103.5	1.3e-32	78	132	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kprl+WtpeLHerF+eav++LGG++kAtPkt++ lm+++gLtl+h+kSHLQkYRl Dr02312.1 78 KPRLKWTPELHERFIEAVTRLGGADKATPKTVMTLMGIPGLTLYHLKSHLQKYRL 132 79****************************************************8 PP
2	Myb_DNA-binding	65.2	1.2e-20	80	131	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r++WT+e++e++++av++lGg t+kt++ mg g+tl+++ks++qky+ Dr02312.1 80 RLKWTPELHERFIEAVTRLGGAdkaTPKTVMTLMGiPGLTLYHLKSHLQKYR 131 89****************99***************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 448 aa Download sequence
MAPVELELAT QVSFNPLRVA NISSYVHVSN MFLMQKMYHH YQNKKSLNPS GAAFFPEKHL 60 FLRRQKAQSP SGLVLSTKPR LKWTPELHER FIEAVTRLGG ADKATPKTVM TLMGIPGLTL 120 YHLKSHLQKY RLGKNLQAQP ETGTDKNGTA CSTVEAEKTL EMTRSLMSNT NDLAQANNTL 180 QISEALQMQI EVQKQLQEQL EVQRHLQLQI EAQGKYLQSV LEKAQETLGK QNLGSNGLEV 240 AMAELSESVS KVSSEYLNIT FPSTKEFSSL QAPQAQTVKI ADCALESCLT MVEGSEQDQE 300 IKKLSTGLTI YSTSLHSKHT TALTLAQPQS AWGRNANSCI IDPSPRGGNS NKTIFPVKMN 360 TNDLSIRLKD NGDEDSSHII PGQQQKEIGT EDHYDDQHNC NTHGGQLDKK RKSNEYGMSW 420 LESQLDLNVQ DDNDAPLVCK QIDLNGCF

Sequence ? help Back to Top

Protein Sequence Length: 448 aa Download sequence

MAPVELELAT QVSFNPLRVA NISSYVHVSN MFLMQKMYHH YQNKKSLNPS GAAFFPEKHL  60
FLRRQKAQSP SGLVLSTKPR LKWTPELHER FIEAVTRLGG ADKATPKTVM TLMGIPGLTL  120
YHLKSHLQKY RLGKNLQAQP ETGTDKNGTA CSTVEAEKTL EMTRSLMSNT NDLAQANNTL  180
QISEALQMQI EVQKQLQEQL EVQRHLQLQI EAQGKYLQSV LEKAQETLGK QNLGSNGLEV  240
AMAELSESVS KVSSEYLNIT FPSTKEFSSL QAPQAQTVKI ADCALESCLT MVEGSEQDQE  300
IKKLSTGLTI YSTSLHSKHT TALTLAQPQS AWGRNANSCI IDPSPRGGNS NKTIFPVKMN  360
TNDLSIRLKD NGDEDSSHII PGQQQKEIGT EDHYDDQHNC NTHGGQLDKK RKSNEYGMSW  420
LESQLDLNVQ DDNDAPLVCK QIDLNGCF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G04030.3	3e-72	G2-like family protein

Link Out ? help Back to Top
Ensembl	Dr02312.1