PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dr01593.1
Organism
Dioscorea rotundata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
Family HSF
Protein Properties Length: 437aa    MW: 50385.3 Da    PI: 5.0122
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dr01593.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind110.61.1e-341552462102
                   HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXXXX CS
  HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellekik 98 
                   Fl+k++e++ed+ +++++sws+  nsfvv+d+++fa+++LpkyFkh+nf+SF+RQLn+YgF+kv+ ++         weF++++F  g++ ll++ik
     Dr01593.1 155 FLTKTFEMVEDPMTDSVVSWSRGRNSFVVWDSQKFATSLLPKYFKHNNFSSFIRQLNTYGFRKVDPDR---------WEFANEEFLGGQRXLLKNIK 242
                   9****************************************************************999.........******************** PP

                   XXXX CS
  HSF_DNA-bind  99 rkks 102
                   r+++
     Dr01593.1 243 RRRN 246
                   *986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 437 aa     Download sequence    
MESGSSARVH GFSEKKSFKT LARAGASLMI SRFFFSSSSL SPSSFLNSMK IPDPFPLLNG  60
VVSLAETLKT VAFPEGLCFH SGLYVSSSKM MSTYNCFYST ERRIECHRQE NYRREEMEHV  120
IVLVKDEEEE EEEEEVTPVV PQPMPRLHDA GPPPFLTKTF EMVEDPMTDS VVSWSRGRNS  180
FVVWDSQKFA TSLLPKYFKH NNFSSFIRQL NTYGFRKVDP DRWEFANEEF LGGQRXLLKN  240
IKRRRNIGQS SQSSPFAHQV SEACIEVGLF GVDTEVERLK RDRKALMVEI LKLKQQQQRS  300
RAQILEMEER IRGTEKKQHQ TMXFLARALN NPMLLDQLRI SNEXRVKKQL DSPGKKRRLP  360
ANLGFEQNME EEXEDLXXRM ENEEEGSGIG LSRESDALLE ELLNESFAGE MPEEVKEEFG  420
EDVEDLVEQL XFLDSMP
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1238244LKNIKRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G26150.12e-83HSF family protein