PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dr01582.1
Organism
Dioscorea rotundata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
Family MYB_related
Protein Properties Length: 449aa    MW: 50629.6 Da    PI: 9.939
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dr01582.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding22.72.3e-07131172345
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 
                       W++eE ++l d+++++  + +  +a ++++ Rt +++ksr++
        Dr01582.1 131 TWSKEETDQLFDLCERFDLR-FIVVADRFPTSRTVEELKSRYY 172
                      7*******************.*********************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 449 aa     Download sequence    
MDAKDILGLP KSSFPAVQEK KPRPPKESQR KPDGVSREVY ALTGGLAPLM PSIEVSHLKR  60
RPLPENKEKI TWQWLPFTSS ARTDNLQLYH WVRVVNGVPP TGDYAFAKYN KSVDVLKYTD  120
EEYEKHLTDP TWSKEETDQL FDLCERFDLR FIVVADRFPT SRTVEELKSR YYAVSRALLI  180
ARAPSFADVS GHPLVKERYN VAHEVERKRA LSSVLSQTRQ QEIRNSEIIA EAKRIMESRM  240
VNKVEEVDVP VDTINIETTE KIATQAESIS PSSNAQPSPS AVAPPTIGAD STSTPASLRM  300
LRVYLRTHVL DQMVQAASST AGLRTIKRVD QTLQDLGVHL KPKVPTKSVC AEHLELRKEI  360
ITLLNLQKQL QNKEAEVSAN RESSYVETPG TPKRTYRGDT DRPFIPESVG FGGERVAKRD  420
HKRKTTARFS DAPPSPPQSK RPRKLKASD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G47210.11e-177MYB_related family protein