PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dr01241.1
Organism
Dioscorea rotundata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
Family ERF
Protein Properties Length: 387aa    MW: 43685.1 Da    PI: 8.0633
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dr01241.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP242.41.8e-13264306147
        AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaai 47 
                +gy GVr+++ +g ++AeI  p++   +kr++lg+f+t eeAa a++
  Dr01241.1 264 TGYLGVRRRP-SGHYAAEITNPYT---KKRHWLGTFDTLEEAALAYD 306
                699*******.7*********865...5******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 387 aa     Download sequence    
MVLWRVLYSS KGPFVRPRIH LAESVLTKAL PLTLVESPLP ATMFAIVPCY STSPKHSRIH  60
AFIEVTMFKC DVWIEKIGTS NGWFYNSYNL CNKRLVESEY SYSCYKHGPT TPRVVMRLPM  120
IVIVKDETGD MEITAFDKHA ESMANIKLDL LCATEEISKT KVIYNAKAII LHGDSLKGKK  180
AIQLAADGPS EQSTSIIDEA SSKRKEHKRD HEDIIPQSNF SYMFPTMSSP PPPPLPPPPP  240
PSKKEKEYCY KPSRHQRRRS KGSTGYLGVR RRPSGHYAAE ITNPYTKKRH WLGTFDTLEE  300
AALAYDTSSI TFSGIDSAQT YFFYMFPTMP SPSPPIPPPP PPPPSPLPPP PPPPLEEQKE  360
YCFEYNFDIS DHDDDWISIT TILLGFG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G12890.17e-21ERF family protein