PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Dr00719.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
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Family | ERF | ||||||||
Protein Properties | Length: 251aa MW: 27887.2 Da PI: 5.3021 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 63.6 | 4.1e-20 | 90 | 139 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 y+GVr+++ +g+WvAeIr p++ r+r +lg+f+ta eAa a+++a+ kl+g Dr00719.1 90 LYRGVRQRH-WGKWVAEIRLPKN---RTRLWLGTFDTAHEAALAYDEAAFKLRG 139 59******9.**********965...5*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 251 aa Download sequence |
MATAIDFYSN WPSFSSDPSQ MELMQALEPF FKSASPSPSL XPSWDQNLSF DSYLSFNGMQ 60 NNQKGGSFLS VQPLPMKHAG TPSPAKPXKL YRGVRQRHWG KWVAEIRLPK NRTRLWLGTF 120 DTAHEAALAY DEAAFKLRGD FARLNFPNLR HSSATSLHSS VDAKLQAICQ TLQAPDSTSX 180 SKTPTTTNTS SSPSLSSSSL SCDQEDESSA GSSPVSEMQS LDFTEVPWDE SESFVLRKYP 240 SWEIDWDAIL S |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G22190.1 | 3e-58 | ERF family protein |
Link Out ? help Back to Top | |
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Ensembl | Dr00719.1 |