PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Dr00691.1

Organism

Dioscorea rotundata

Taxonomic ID

55577

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea

Family

AP2

Protein Properties

Length: 316aa MW: 35215.8 Da PI: 5.0367

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Dr00691.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	30.1	1.2e-09	132	188	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpse..ng.krkrfslgkfgtaeeAakaaiaarkkleg 55 s y+GV+ k++g+++A+++d ++ g krk + g++ ++e+Aa+ ++ a++k++g Dr00691.1 132 SNYHGVTKLKWSGKFEAHLWDNTShvEGrKRKGKH-GSYESEEQAARSHDLAALKYFG 188 569****************66668777778888.99****************98 PP
2	AP2	55.3	1.6e-17	235	288	3	56
AP2 3 ykGVrwdkkrgrWvAeIrdpseng.kr..krfslgkfgtaeeAakaaiaarkklege 56 y+GV++++k+g+W A+I + g r k ++lg+f+t+eeAa+a++ a+ +l+g+ Dr00691.1 235 YRGVTRRRKDGKWQARIGRV---GeSRdaKDIYLGTFDTEEEAAEAYDIAAIELRGA 288 9**************998...443347***********************995 PP

Sequence ? help Back to Top
Protein Sequence Length: 316 aa Download sequence
MTENFPDPME VPNPLGNLNP KPVLPSLNDD DGSEATVAAE KDAGDFVLET PSEKLTQEPS 60 EEASKSHEAE AWDAVLVDDI AGENKSNALE EAPEKNSGEC RPGLIVPEKK EERKVGTLVA 120 AAMKKYAAPR SSNYHGVTKL KWSGKFEAHL WDNTSHVEGR KRKGKHGSYE SEEQAARSHD 180 LAALKYFGPG PNXKLNFPIS EYEKEMEIMT KMSHEEFVAY VRRQSSCFSR GASMYRGVTR 240 RRKDGKWQAR IGRVGESRDA KDIYLGTFDT EEEAAEAYDI AAIELRGAHA VTNFDISNYY 300 EGGTLKRLDD TCKQET

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G72570.1	3e-58	AP2 family protein

Link Out ? help Back to Top
Ensembl	Dr00691.1