PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dr00162.1
Organism
Dioscorea rotundata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
Family AP2
Protein Properties Length: 502aa    MW: 56549 Da    PI: 10.2165
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dr00162.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP240.28.5e-1364120155
        AP2   1 sgykGVrwdkkrgrWvAeIrd.pseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 
                s y+GV++++++gr++A+++d  ++n+ ++k+   g ++ +e Aa+a++ a++k++g
  Dr00162.1  64 SIYRGVTRHRWTGRYEAHLWDkSTWNQnQNKKGKQGAYDDEEAAARAYDLAALKYWG 120
                57*******************6666777775555599******************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 502 aa     Download sequence    
MAAASSSSLK GEATAVELSE GRKTPAAADQ LSVGGMKKAR RERVCTAKER ISRMPPCAAG  60
KRSSIYRGVT RHRWTGRYEA HLWDKSTWNQ NQNKKGKQGA YDDEEAAARA YDLAALKYWG  120
AGTLINFPVS DYSRDLEEMQ MVSKEDYLVS LRRKSSAFSR GFPKYRGIAR QPQNNRWETP  180
FSQMFGNEYL NNLNCSTSKD PSLEGKYTSP FCMERKIDLT SYIRWWVPKK ARQSDSANNT  240
EEINRELRLI EGPIHPTEPY QFPVLGPAQK GKSKIRTISA CNIISQSAAF KNFENKLKES  300
QEGSCSKQME NQKSKAILFS DDGIDRSGAA LDLREFPVQR APYSLAPLLS APLRTNWNPV  360
DPVHDPVFWA SLVPPTAQSL PTSEYPIMIL IDGTFSHHGN SKGVLKLDKV RHDRVHGTEK  420
IRPKAILFKN RDLLLHRENI DESKDQAYPH LLRHQGTSRR HKGSGASTRS STLEANLKEK  480
GVLSSFFRSS VISSMLYPSM RG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G41710.11e-102AP2 family protein