PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Dr00005.1

Organism

Dioscorea rotundata

Taxonomic ID

55577

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea

Family

BES1

Protein Properties

Length: 665aa MW: 74858.6 Da PI: 6.469

Description

BES1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Dr00005.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF822	148.9	4.2e-46	48	193	1	134
DUF822 1 ggsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpl.......eeaeaagssasaspess 93 +g+grk+++kE+E++k+RER+RRai+++++aGLR++Gn++lp+raD+n+Vl+AL+reAGw v++DGttyr + l + + + +s es+ Dr00005.1 48 AGKGRKEREKEKERTKLRERHRRAITSRMLAGLRQYGNFPLPARADMNDVLAALAREAGWAVDPDGTTYRTSPVALvptppppPPPGQLAPFPVRSAESP 147 589*****************************************************************6532222223234566677778889*** PP DUF822 94 lq.sslkssalaspvesysaspksssfpspssldsislasa....a 134 l+ +slk+++ ++ +++++++ + ++++sp+s+ds+ +a++ + Dr00005.1 148 LSaTSLKNCHAKASLDHQASVFRIEESLSPASIDSVVVAESgiikN 193 999*******************************9998755441 PP

Sequence ? help Back to Top
Protein Sequence Length: 665 aa Download sequence
MNVKQDLDQP HSDQSSDHPQ PPQRRPRGFA AAAAAASVAA GGAGGPSAGK GRKEREKEKE 60 RTKLRERHRR AITSRMLAGL RQYGNFPLPA RADMNDVLAA LAREAGWAVD PDGTTYRTSP 120 VALVPTPPPP PPPGQLAPFP VRSAESPLSA TSLKNCHAKA SLDHQASVFR IEESLSPASI 180 DSVVVAESGI IKNEKYVNPS PINSLECVEA DQLMRDSVEH EGGFVGTPYI PVYVMFPTGI 240 VNSYCQLIDP EAIRQELRHL KSLNIDGVVV DCWWGIVEGW SPHKYQWSGY RDLFNIVNEF 300 KLKLQVVMAF HECGGNGTGD MPISLPKWVL EIGKDNQDIF FTDREGRRNT ECLSWGIDKE 360 RVLRGRTGIE VYFDFMRSFR MEFDDLFGDG LIAAVEIGLG ASGELKYPSF PERMGWRYPG 420 IGEFQCYDKY LQQNLRRAAK LRGHTFWAKG PDNAGQYNSR PHETGFFCDR GDYDSYYGRF 480 FLRWYAQTLI DHADQVLSLA NLAFEGTQLV IKIPSIYWWY KTTSHAAELT AGFYNPTNQD 540 GYSPIFDMLK KHSVTLKFVC PGTQSSAQEH EAFADSEGLS WQVLNSAWDR DLTVCGQNSL 600 PCYDREMFVR ILDTAKPKNN PDHRHLAFFT FQHLSPIFMQ REMCLLELDN FIKSMHGELT 660 AYVEA

Sequence ? help Back to Top

Protein Sequence Length: 665 aa Download sequence

MNVKQDLDQP HSDQSSDHPQ PPQRRPRGFA AAAAAASVAA GGAGGPSAGK GRKEREKEKE  60
RTKLRERHRR AITSRMLAGL RQYGNFPLPA RADMNDVLAA LAREAGWAVD PDGTTYRTSP  120
VALVPTPPPP PPPGQLAPFP VRSAESPLSA TSLKNCHAKA SLDHQASVFR IEESLSPASI  180
DSVVVAESGI IKNEKYVNPS PINSLECVEA DQLMRDSVEH EGGFVGTPYI PVYVMFPTGI  240
VNSYCQLIDP EAIRQELRHL KSLNIDGVVV DCWWGIVEGW SPHKYQWSGY RDLFNIVNEF  300
KLKLQVVMAF HECGGNGTGD MPISLPKWVL EIGKDNQDIF FTDREGRRNT ECLSWGIDKE  360
RVLRGRTGIE VYFDFMRSFR MEFDDLFGDG LIAAVEIGLG ASGELKYPSF PERMGWRYPG  420
IGEFQCYDKY LQQNLRRAAK LRGHTFWAKG PDNAGQYNSR PHETGFFCDR GDYDSYYGRF  480
FLRWYAQTLI DHADQVLSLA NLAFEGTQLV IKIPSIYWWY KTTSHAAELT AGFYNPTNQD  540
GYSPIFDMLK KHSVTLKFVC PGTQSSAQEH EAFADSEGLS WQVLNSAWDR DLTVCGQNSL  600
PCYDREMFVR ILDTAKPKNN PDHRHLAFFT FQHLSPIFMQ REMCLLELDN FIKSMHGELT  660
AYVEA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G45300.1	0.0	BES1 family protein

Link Out ? help Back to Top
Ensembl	Dr00005.1