PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028556766.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | bHLH | ||||||||
Protein Properties | Length: 482aa MW: 53020.4 Da PI: 6.5254 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 27.5 | 5.7e-09 | 303 | 351 | 3 | 55 |
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++i +++ L++l+P + sk Ka +L + ++Y++sLq XP_028556766.1 303 NSHSLAERVRREKISERMKFLQDLVPGC----SKVTGKAVMLDEIINYVQSLQ 351 58*************************9....556*****************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 482 aa Download sequence |
MRSWSEAKLS FREERKMDLG EKGKFGLEKR TVDSLNCNTT GLTTTEWNQI GSLPCPSASM 60 VDSFGHVIWN QLPSNTHNLS FSNAQATASS STIGKPVPMN WNPSDSLTKG GMFFSTGMGM 120 LPLSLSQFPC DAGFTERAAR FSCFSDVAYP FIVPGSSDAT AEAQMQKNEA DRIEALKGRS 180 GLIDQSSNSG SPMKEQREKG PNEFSEPEFS DDARDESPNS SKGVFGINKR KRSNQDMESD 240 QGQAAAQLPF EAAKDVTDNK QKEEKNSSTM ANVKPLGKNP KESGEAPKED YIHVRARRGQ 300 ATNSHSLAER VRREKISERM KFLQDLVPGC SKVTGKAVML DEIINYVQSL QRQVEFLSMK 360 LAAVNPSIDF NIEGLLSKDL FQTRTGSSSV IGFTPEMIHQ QLHPPHQGLI QVGMAGVMNP 420 SDAFRRALNV QLASTSGFKD STQQMTNAWD EDLHNVVQMT YGNNPPLKTQ DLNGAPRDGF 480 PL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G68920.3 | 3e-95 | bHLH family protein |