PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028556744.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family bHLH
Protein Properties Length: 348aa    MW: 38719.2 Da    PI: 6.3796
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028556744.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH49.76.5e-164998255
                    HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH  2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                    r +h+++E+rRR++iN++f+ L  llP++    ++K +Ka+ L +++eYI+ Lq
  XP_028556744.1 49 RLKHSAIEQRRRSKINDRFQMLIGLLPNS----DQKRDKASFLLEVIEYIQFLQ 98
                    789*************************9....9*******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 348 aa     Download sequence    
MESFSRFNMG FEEDDEDEEE FGKGEGSSKK ELTLKLDGKS NEQKASTPRL KHSAIEQRRR  60
SKINDRFQML IGLLPNSDQK RDKASFLLEV IEYIQFLQEK VQMYEXISPV SDENTRLMLL  120
NNRNGSGDPM NDPQVFKNGA SSGLLVSDNG IPESIGECFC FSTKASFGTV FLLASRSSSL  180
VQKLKFFTKK LLQEAIKKQS QIKRKSAPPA SSQPNFHSSV GRGIFLGQPL QRFLPEADSM  240
VSQSESEWLR SSFPVDCTVS NYVFNEQEEL TIDEGTICAS NAYSQRLLNT LSQMLQNSGT  300
DLSQANISVH INLGRRSGSS HNTSTSIATS KDQGMNHDPA TLLLVKPG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69010.14e-41bHLH family protein