PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028556731.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | MYB | ||||||||
Protein Properties | Length: 526aa MW: 57624.9 Da PI: 4.7661 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 53.4 | 5.9e-17 | 42 | 89 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT Ed +l+d vk++G g+W+++ r g++R++k+c++rw ++l XP_028556731.1 42 KGPWTSTEDAILIDFVKKHGEGNWNSVQRNTGLRRCGKSCRLRWANHL 89 79******************************************9986 PP | |||||||
2 | Myb_DNA-binding | 43.1 | 9.8e-14 | 95 | 138 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +g+ T+eE+e +++ +++ G++ W+ a+ ++ gRt++++k++w++ XP_028556731.1 95 KGALTPEEEECIIQMHAKIGNK-WAQMAALLP-GRTDNEIKNFWNT 138 6788******************.*********.***********96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 526 aa Download sequence |
MCAVKNDGDT ERLPKEQPDS SPNDEGSWSG SPTAGEGVVL KKGPWTSTED AILIDFVKKH 60 GEGNWNSVQR NTGLRRCGKS CRLRWANHLR PELKKGALTP EEEECIIQMH AKIGNKWAQM 120 AALLPGRTDN EIKNFWNTRT KRLQRAGLPL YPASSICSGD SNENQLIQID GEFCNGDIEN 180 SGVLHEAMNE MQEFGFDPCK TTIGQVSYAP LSDLLSQGLE WPYTRSLLNQ GLNDIKRNIV 240 SETFLPGYHG SLGSVVSNFK ELTSGHSESM YRNLGLGFSY DADPDMKNLL SCSIPGSHGL 300 SHGNFSASRH SAGTVKLELP SLQCPDTNYS NWMTCPDTPP YNILVQSPGN VSLMSDCASP 360 RSNGLLEALV QESQKINCGK NQSSEKSSCS SAITLSDIME STTVNFCTAE WEETCDQRSP 420 FSQSVDEHAQ ITSNSLEELT PKATSGSDGK MVVEQDSTTS TPDTQPGFLR PDALLGSNWN 480 LRDSRRTKEN SDSFCALQGD NLSPAEVSLD SCPWNSMPSI HQVPEH |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G06100.3 | 3e-76 | MYB family protein |