PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028556452.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | GRAS | ||||||||
Protein Properties | Length: 113aa MW: 12912.7 Da PI: 4.9112 | ||||||||
Description | GRAS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GRAS | 67.6 | 2.4e-21 | 2 | 80 | 208 | 286 |
GRAS 208 lqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvE 286 ++l +l de+vsles+ d+vL+++++l+P+v+v+ ++ +n++ F++rf eal ++salfd+le+++ re+e+r+ +E XP_028556452.1 2 YRLRNLADETVSLESPSDQVLRTIRKLNPNVFVLGVVNITYNAPFFVTRFKEALFHFSALFDMLETNVERENEQRRLLE 80 68999**********************************************************************9998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 113 aa Download sequence |
MYRLRNLADE TVSLESPSDQ VLRTIRKLNP NVFVLGVVNI TYNAPFFVTR FKEALFHFSA 60 LFDMLETNVE RENEQRRLLE IVKEGDDDGG VAESLTHGPA VSAEVPVWRR SMT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G37650.1 | 3e-30 | GRAS family protein |