PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028555687.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | MYB | ||||||||
Protein Properties | Length: 291aa MW: 33069.3 Da PI: 8.7881 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 47.3 | 4.8e-15 | 14 | 62 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48 +g+W +eEd +l+d+++++G g +W + +++ g++R++k+c++rw++yl XP_028555687.1 14 KGPWAPEEDNKLKDYIEKYGIGgNWIALPQKAGLRRCGKSCRLRWLNYL 62 79******************999************************97 PP | |||||||
2 | Myb_DNA-binding | 40.7 | 5.4e-13 | 69 | 111 | 2 | 46 |
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 g+++ +Ed ++ +++ G++ W+ Ia++++ gRt++++k++w++ XP_028555687.1 69 GNFSDDEDRIICSLFASIGSR-WSIIASHLP-GRTDNDIKNYWNT 111 89*******************.*********.***********97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 291 aa Download sequence |
MGRAPCCDKA NVKKGPWAPE EDNKLKDYIE KYGIGGNWIA LPQKAGLRRC GKSCRLRWLN 60 YLRPNIKHGN FSDDEDRIIC SLFASIGSRW SIIASHLPGR TDNDIKNYWN TKLKKKLFGI 120 SPTQRKSSHQ VKQQNQQLPA SLDHNLLHPS TSTSLLSHHQ YYPSIFSNST TSSPLVQMWP 180 SQQYQTELNS SKLLIFGGDQ LNCCSSEISF GRPMEFESEN YSLFNEIGDQ KLLFGSITGG 240 GGVIEAPLIN SDYEEIKQVI NPKNIYFDDP RRATEASGNS FKPQERVMYY Y |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G57620.1 | 2e-76 | MYB family protein |