PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028555293.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | ERF | ||||||||
Protein Properties | Length: 248aa MW: 26592.4 Da PI: 9.2281 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 61.3 | 2.2e-19 | 47 | 96 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr+++ +g+WvAeIr+p++ r+r +lg+f taeeAa+a+++a++ l+g XP_028555293.1 47 RYRGVRQRS-WGKWVAEIREPRK---RTRKWLGTFSTAEEAARAYDRAALILYG 96 59****999.**********954...5**********************99887 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 248 aa Download sequence |
MDSSSNQPSP IEQYPLSHPN SPTSSGSSGG SRKVRRGKGG PDNSKFRYRG VRQRSWGKWV 60 AEIREPRKRT RKWLGTFSTA EEAARAYDRA ALILYGPRAQ LNLQPSSSNS STDGANGRNS 120 SSSSSSTSSS TTTLRPLLPR PTGFPLPILP YSYPTIPYPY PTQLTTGAAV TPPVGVTNMG 180 SEEMNSLVGS MSSGLSISFP PEPPSVEVGS ASMDIPATPS MGGGWGYEDY SMASACFWDD 240 ADPFLFDF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G40220.1 | 7e-29 | ERF family protein |