PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028555242.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | DBB | ||||||||
Protein Properties | Length: 179aa MW: 19359.8 Da PI: 6.2855 | ||||||||
Description | DBB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-B_box | 24.3 | 6.6e-08 | 4 | 47 | 5 | 42 |
zf-B_box 5 kCpeHeekelqlfCedCqqllCedClleeHkg......Htvvpl 42 C+ +e+ e+ C ++ lC dC ++ H H++vpl XP_028555242.1 4 QCDACEKAEAVVLCCADEAALCWDCDEKVHAAnklagkHQRVPL 47 7*****************************66899999999986 PP | |||||||
2 | zf-B_box | 28.8 | 2.5e-09 | 59 | 99 | 3 | 37 |
zf-B_box 3 erkCpeHeekelqlfCedCqqllCedClleeHkg......H 37 + C+ ++ek +fC +++ llC+ C l++H+ H XP_028555242.1 59 LPGCDICQEKAGYFFCLEDRALLCRHCDLTIHSAspfvshH 99 667*****************************667777755 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 179 aa Download sequence |
MKIQCDACEK AEAVVLCCAD EAALCWDCDE KVHAANKLAG KHQRVPLLLP SAASATSKLP 60 GCDICQEKAG YFFCLEDRAL LCRHCDLTIH SASPFVSHHQ RFLITGARVA LQHYLTNNSS 120 SNRSSAAVNE FSNSSGSIGN SSNPAGSLAS TSLAVEKTEG FKPNWPWNEI FEGPDFDHC |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G78600.1 | 1e-53 | DBB family protein |