PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028555242.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family DBB
Protein Properties Length: 179aa    MW: 19359.8 Da    PI: 6.2855
Description DBB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028555242.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-B_box24.36.6e-08447542
        zf-B_box  5 kCpeHeekelqlfCedCqqllCedClleeHkg......Htvvpl 42
                     C+ +e+ e+   C  ++  lC dC ++ H        H++vpl
  XP_028555242.1  4 QCDACEKAEAVVLCCADEAALCWDCDEKVHAAnklagkHQRVPL 47
                    7*****************************66899999999986 PP

2zf-B_box28.82.5e-095999337
        zf-B_box  3 erkCpeHeekelqlfCedCqqllCedClleeHkg......H 37
                     + C+ ++ek   +fC +++ llC+ C l++H+       H
  XP_028555242.1 59 LPGCDICQEKAGYFFCLEDRALLCRHCDLTIHSAspfvshH 99
                    667*****************************667777755 PP

Sequence ? help Back to Top
Protein Sequence    Length: 179 aa     Download sequence    
MKIQCDACEK AEAVVLCCAD EAALCWDCDE KVHAANKLAG KHQRVPLLLP SAASATSKLP  60
GCDICQEKAG YFFCLEDRAL LCRHCDLTIH SASPFVSHHQ RFLITGARVA LQHYLTNNSS  120
SNRSSAAVNE FSNSSGSIGN SSNPAGSLAS TSLAVEKTEG FKPNWPWNEI FEGPDFDHC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G78600.11e-53DBB family protein