PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028554854.1

Organism

Dendrobium catenatum

Taxonomic ID

906689

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium

Family

TALE

Protein Properties

Length: 339aa MW: 37851.6 Da PI: 6.525

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028554854.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	27.7	4.7e-09	265	300	20	55
HHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHH CS Homeobox 20 eknrypsaeereeLAkklgLterqVkvWFqNrRake 55 +k +yps++e+ L++++gL+++q+ +WF N+R ++ XP_028554854.1 265 YKWPYPSETEKVALSESTGLDQKQINNWFINQRKRH 300 4679*****************************885 PP
2	ELK	30.5	8e-11	220	241	1	22
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 ELK +Ll+KYsgyL+sL+qE+s XP_028554854.1 220 ELKLHLLKKYSGYLSSLRQELS 241 9*******************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 339 aa Download sequence
MEEFLHLGGS STRTPFTFSS LPAVGGPQQA SAASGSSFFY GARSQNPNPS TSTPKLEPGS 60 STYFSTDVES IKAKIISHPQ YPALLNAYMD CQKVGAPPEV VARLSTVARE LEARQLASPS 120 GCRRGTQADP ELDQFMEAYC NMLVKYKEEL TRPVQEAMDF LRKVESQLNS LTNGATVPFF 180 TSASLADEKC EGVVSSEEDQ DGSGAEAEVP EIDPRAEDKE LKLHLLKKYS GYLSSLRQEL 240 SKKKKKGKLP KDARQKLLNW WELHYKWPYP SETEKVALSE STGLDQKQIN NWFINQRKRH 300 WKPSEDMQFV VMDSFHPQNA AALYMGGQFL ADGNYRFGP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G08150.1	1e-106	TALE family protein