PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028554852.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | GRF | ||||||||
Protein Properties | Length: 201aa MW: 22436.2 Da PI: 9.6975 | ||||||||
Description | GRF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRC | 77.4 | 1.4e-24 | 82 | 125 | 1 | 44 |
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkske 44 d+epgrCrRtDGKkWRCs++++ ++k+CErH+hrg++rsrk++e XP_028554852.1 82 DPEPGRCRRTDGKKWRCSKEAYLDSKYCERHMHRGKNRSRKPVE 125 79***************************************997 PP | |||||||
2 | QLQ | 61.1 | 3.1e-21 | 11 | 46 | 2 | 37 |
QLQ 2 aFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiqk 37 +FTa+Q+q+L++Q+l+yKy+a++ P+P++L+++i++ XP_028554852.1 11 PFTASQWQELEHQALIYKYIASGIPIPSDLILPIRR 46 9*********************************86 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 201 aa Download sequence |
MMSGSGGSRY PFTASQWQEL EHQALIYKYI ASGIPIPSDL ILPIRRSFLL DSTATSPSLA 60 FPTQAQLGWS CFQMGFGKKA EDPEPGRCRR TDGKKWRCSK EAYLDSKYCE RHMHRGKNRS 120 RKPVEISLSA KTNQSSSSSS PSSAQSPYLA NLSISTPQSN YNLSCPYSNY SRPPWAAHFS 180 ADSGTSHLQL NSDKLFLILH F |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G13960.1 | 1e-52 | GRF family protein |