PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028553819.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family TCP
Protein Properties Length: 308aa    MW: 34666.9 Da    PI: 6.9603
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028553819.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP92.68.3e-2955134366
             TCP   3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt................s 66 
                     g+kdrhski+T +g+RdRRvRls+++a++++dLqd+LG+ ++sk ++WL+ +a+ +i+ l+                   
  XP_028553819.1  55 GGKDRHSKISTMKGLRDRRVRLSIPTAIQVYDLQDKLGLNQPSKVVDWLISAAQNEIDRLPPPplsphgssfiqfpppaA 134
                     78***********************************************************9944444444442222220 PP
Sequence ? help Back to Top
Protein Sequence    Length: 308 aa     Download sequence    
MMKIYKMIRD SREKEVQIKQ EEGTIDYTMQ QTSKRLCSSI QNPRIMRVSQ ADHFGGKDRH  60
SKISTMKGLR DRRVRLSIPT AIQVYDLQDK LGLNQPSKVV DWLISAAQNE IDRLPPPPLS  120
PHGSSFIQFP PPAARTMDEQ NINCNGISSQ AFSVNNTDPL MIISNNYVDD IQSFPKSTMS  180
SFNSYHQMEP YVSQVGNNYS QVALQHDFHL DTASSSLPSS SSSPLALMQM ETQLMMPSLF  240
SSYLTSTNNF QTPSTFAQLL PWNSSSINFK QFVHHDEAAQ QQENMRGTST TVYKDSGAGY  300
GYSAGDFF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G02150.13e-33TCP family protein