PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028553782.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family NAC
Protein Properties Length: 300aa    MW: 33775.7 Da    PI: 5.6794
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028553782.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM1034.1e-3227257128
             NAM  57 ewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                     ew+fF++rd+ky++g+r+nrat+sgyWkatgkd+++++ +++ +g++ktLvfy+grap ge+tdWvmheyrl
  XP_028553782.1   2 EWFFFCPRDRKYPNGSRTNRATNSGYWKATGKDRTITC-ENSIKGMRKTLVFYRGRAPGGERTDWVMHEYRL 72 
                     8*************************************.8889***************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 300 aa     Download sequence    
MEWFFFCPRD RKYPNGSRTN RATNSGYWKA TGKDRTITCE NSIKGMRKTL VFYRGRAPGG  60
ERTDWVMHEY RLCEHLPQGN ISFLGGYALC RVVKRNEHLH QGEAKFKRVP PSVARETSKR  120
KYNSKVPSSS LEGSSSQVVS LLDVSNGPFH SNFFKETQFE LASAMVDASD QSPLVLSDVS  180
TGFTIEEDIS EQFFPVQFPF STESCLTNGI SPVSSFSSLT DEAFSVEQID RNCLSSICPS  240
PLHSMSIYYN EESLPLQSLD WVADNSFLTR SNGIIEPLCR QASGDEQNLW SQEDGSMFVI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G17980.16e-45NAC family protein