PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028553708.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family WRKY
Protein Properties Length: 331aa    MW: 35459.5 Da    PI: 10.3779
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028553708.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY100.11.3e-31260317359
                     -SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                     D+y+WrKYGqK++kgs++pr+YY+C+s  gCp++k+ver+ +dp+++++tYegeH+h+
  XP_028553708.1 260 DEYSWRKYGQKPIKGSPYPRGYYKCSSLrGCPARKHVERAPDDPSMLIVTYEGEHRHS 317
                     9*************************998****************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 331 aa     Download sequence    
MAVDLIGYAK MDDQITIQEA AAAGIRSMEN LIFQLNRHHQ KSTSSSATAA TIDCREIADH  60
TVSKFKKMIS ILNRTGHARF RRGPSSPILP AAVKPTPQVA VLPSAPAMAV PVVPLQSLTL  120
DFTKPSSVGG GSTDLAIVAA SSGKYIKETF SISTPISSAN SSFMSSITGD GSVSNGRPGG  180
TTSLLLPPAP AISAGGVVAG KPPLAAYKKR CHSHAHSEDF AGKFAANGGR CHCSKRRKNR  240
VKRTIRVPAI SSKMADIPPD EYSWRKYGQK PIKGSPYPRG YYKCSSLRGC PARKHVERAP  300
DDPSMLIVTY EGEHRHSQPS DALVFDTHRE I
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G31550.11e-106WRKY family protein