PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028553434.1

Organism

Dendrobium catenatum

Taxonomic ID

906689

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium

Family

NAC

Protein Properties

Length: 285aa MW: 32926.2 Da PI: 6.5468

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028553434.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	155	3.4e-48	11	137	3	128
NAM 3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.. 95 pGfrFhPt+ee++++yL++ ++gkkl++ ++i++v++y ++PwdLp+++k +e+ewyfF++rd+++ +g r+nr+t++g+Wkatg+d+++ s+ XP_028553434.1 11 PGFRFHPTEEEILDFYLRRAAAGKKLNV-DIITTVNLYLYDPWDLPAMAKMGEREWYFFVPRDRRQGNGGRPNRTTERGFWKATGSDRHIRSSvd 104 9*************************.99***********9889999**********************************9887 PP NAM 96 kgelvglkktLvfykgrapkgektdWvmheyrl 128 ++l+glkktLv+y+grap+g+ktdW+m+eyrl XP_028553434.1 105 PRRLIGLKKTLVYYRGRAPRGTKTDWIMNEYRL 137 7889*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 285 aa Download sequence
MERKGSEIEL PGFRFHPTEE EILDFYLRRA AAGKKLNVDI ITTVNLYLYD PWDLPAMAKM 60 GEREWYFFVP RDRRQGNGGR PNRTTERGFW KATGSDRHIR SSVDPRRLIG LKKTLVYYRG 120 RAPRGTKTDW IMNEYRLPDS SNSFGSAPTP KEDIVICKVY RKATPLRELE QRAAMEEESR 180 VSIADTSSTS SGHETLQNFT YDKFIKDMKE EEQELLPIEA AEVSSLPEAM MKPSEPAAGR 240 QLPSLPELQV PSHGSFDWSQ DPFINQLRSP WLEQWSPLYA QMLNF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G17040.1	8e-90	NAC family protein