PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028553185.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | MYB | ||||||||
Protein Properties | Length: 335aa MW: 38507.8 Da PI: 8.5607 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 62.9 | 6.3e-20 | 199 | 245 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g WT+eEde+l +av+ + g++Wk+Ia++++ Rt+ qc +rwqk+l XP_028553185.1 199 KGQWTPEEDEILCNAVHHYHGKNWKKIAECFP-DRTDVQCLHRWQKVL 245 799*****************************.************986 PP | |||||||
2 | Myb_DNA-binding | 61 | 2.6e-19 | 251 | 297 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+W++eEde++++ v+++G++ W+tI++ ++ gR +kqc++rw+++l XP_028553185.1 251 KGPWSKEEDEIIIEMVNKFGPKKWSTISQALP-GRIGKQCRERWHNHL 297 79******************************.*************97 PP | |||||||
3 | Myb_DNA-binding | 27.2 | 9.3e-09 | 303 | 335 | 1 | 35 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgR 35 +++WT+eE+ l++a++ +G++ W+ + ++ gR XP_028553185.1 303 KDAWTQEEEIALIHAHQIYGNK-WAELTKFLP-GR 335 689*******************.****99999.88 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 335 aa Download sequence |
MVLYFKARPE VGDYTIYMGL DKHENEELIK YGFAEDIWFH VDKMSSAHVY LRLNKNQTID 60 DISEGLLEDC AQLVKANSIQ GNKVNNVDVV YTPWYNLKKT PSMDVGQVGF HNSKMLFKVR 120 TVRVEKRVNE IVNRLNKTKV ERNPDLKDGR VGSSSATTPD GMGEASSSTS LIDGSDCDFL 180 RQQQALHGRI TGPKRRSTKG QWTPEEDEIL CNAVHHYHGK NWKKIAECFP DRTDVQCLHR 240 WQKVLNPALV KGPWSKEEDE IIIEMVNKFG PKKWSTISQA LPGRIGKQCR ERWHNHLNPA 300 INKDAWTQEE EIALIHAHQI YGNKWAELTK FLPGR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G32730.1 | 1e-89 | MYB family protein |