PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028552743.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family GATA
Protein Properties Length: 279aa    MW: 30138.2 Da    PI: 7.1298
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028552743.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA42.87.3e-14181214132
            GATA   1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrk 32 
                     C+nCg +   Tp +Rrgp g+++LCnaCGl+++ 
  XP_028552743.1 181 CQNCGISAklTPAMRRGPGGPRSLCNACGLMWAN 214
                     *****9999***********************86 PP
Sequence ? help Back to Top
Protein Sequence    Length: 279 aa     Download sequence    
MSAPFGADLP NHGGDARAQM VEGAPADQEG EQEAADAAMQ LVSSNPNQLT LLFQGEVYVF  60
DSVTPEKVQA VLLLLGGCEV PTCVSGSALV CNQDDRGMDD ILRRTNIPAK RLASLIRFRE  120
KRKERCFDKK IRYDVRKEVA LRMKRRKGQF AGKANPDDEA SPSLSCDQAS SQDDTPRETN  180
CQNCGISAKL TPAMRRGPGG PRSLCNACGL MWANKVWLGT LRSVSQSPKM TTLALPSPNG  240
MVPASSESRI DVKPPIISNN HGSAEILTQE AQAEVQPGE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G21175.26e-64GATA family protein