PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028552637.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | WRKY | ||||||||
Protein Properties | Length: 176aa MW: 20706.4 Da PI: 8.4667 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 61 | 2.1e-19 | 48 | 109 | 3 | 59 |
-SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-S..SSTTEEEEEEES--SS- CS WRKY 3 DgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversa..edpkvveitYegeHnhe 59 Dg++WrKYG K++ +sefpr+YYrC++ gC+++k +++++ ++p ++tY+ +H+++ XP_028552637.1 48 DGHQWRKYGEKHISNSEFPRNYYRCSHFkeqGCHATKTIQQKEgnDEPPKYIVTYKMHHTCK 109 9*************************977789********98622578899*********97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 176 aa Download sequence |
MEIYNTTSFR FPPNIVSWLL CFYLKERKSH CREEQKSWSI VTPAPHFDGH QWRKYGEKHI 60 SNSEFPRNYY RCSHFKEQGC HATKTIQQKE GNDEPPKYIV TYKMHHTCKS MVPIYSLFLE 120 STTQSAPIIS FAPGNTPHNK QTETYKDEND FKKHDQIISS SNVPMLIDLN LTIESK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G22570.1 | 3e-17 | WRKY family protein |