PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028552624.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | MYB | ||||||||
Protein Properties | Length: 327aa MW: 37236.8 Da PI: 9.1503 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 52.7 | 9.6e-17 | 74 | 119 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg W + Ed +l+++v+q+G+ +W++Ia+++ gR++k+c++rw++ XP_028552624.1 74 RGHWRPTEDTKLKELVEQFGPQNWNLIAEKLE-GRSGKSCRLRWFNQ 119 899*****************************.***********996 PP | |||||||
2 | Myb_DNA-binding | 50 | 6.9e-16 | 126 | 169 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 r+++T+eE+e+l+ + + +G++ W++Iar ++ gRt++ +k+ w+ XP_028552624.1 126 RKAFTAEEEERLLSVQHHYGNK-WSLIARFFP-GRTDNAVKNQWHV 169 789*******************.*********.***********86 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 327 aa Download sequence |
MSLWQQRSEA PMLLLSSPQS QPSFFTSSVP PLEREFMRSE EGWSFSNSHD DLQVSDGSME 60 SRDLETKHAK LCTRGHWRPT EDTKLKELVE QFGPQNWNLI AEKLEGRSGK SCRLRWFNQL 120 DPRINRKAFT AEEEERLLSV QHHYGNKWSL IARFFPGRTD NAVKNQWHVI MARKQRENSI 180 SYRRRRIASS TSFNPSIHLR TLEHNTSSAE STITSTREES VSTATTRTVH GLVLSPQQKK 240 ANFFIMGGKS SVDQIALSDS TSKASATESV VIRGAELERG RINLPFFDFL GVGAAEEKPL 300 MVIRMGSEKA DYQQKICFDG DFSPAYV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G17800.1 | 2e-62 | MYB family protein |