PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028552551.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | TALE | ||||||||
Protein Properties | Length: 403aa MW: 46159.1 Da PI: 6.1987 | ||||||||
Description | TALE family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 27.7 | 4.7e-09 | 341 | 378 | 19 | 54 |
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 Fe ++yps +e+ LA+++gLt +q+++WF N R + XP_028552551.1 341 FEHflHPYPSDNEKLFLASQTGLTRNQISNWFINARVR 378 564459******************************88 PP | |||||||
2 | BELL | 65.9 | 8.2e-22 | 223 | 288 | 7 | 72 |
BELL 7 kkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 ++ +kL +l+ee++kr k y + + ++ sFeav g gsa+ Yt+l ++a+S+hF +L++ i+++i XP_028552551.1 223 NRMNKLFTLQEELEKRQKIYFHRMDELVTSFEAVGGPGSAAAYTALTSRAMSKHFANLRESIINHI 288 6899***********************************************************997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 403 aa Download sequence |
MVPQELPKEP IGVSEMNNRQ SHPGGICYCS HWNSVDRGLV RPHSLPSSFQ PHDTQIRRSV 60 EPFSVRCKED DFSSFDHIQG HGLSLSLGPE LELEPNNVRP YDYNQAQMVE NVMRNKSLIE 120 LMCEPSCSCA ERLSDDGIIC DQDVDGSIYN SRCSNTKFDN MAPVMSVLQK SPYLKAAQQL 180 LDEAVCVCNF VPEPSSEKDA HRKNQIKENA HTVHLSREEQ EVNRMNKLFT LQEELEKRQK 240 IYFHRMDELV TSFEAVGGPG SAAAYTALTS RAMSKHFANL RESIINHIES SREAFSKDMP 300 KNLKPKRESL QHLGLIHVGQ IWRPLRGLPE DSVMVLRAWL FEHFLHPYPS DNEKLFLASQ 360 TGLTRNQISN WFINARVRLW KPMIEEMYRE EFAEDQGDSN SSP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G34610.2 | 3e-65 | TALE family protein |