PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028552550.1

Organism

Dendrobium catenatum

Taxonomic ID

906689

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium

Family

TALE

Protein Properties

Length: 403aa MW: 46159.1 Da PI: 6.1987

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028552550.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	27.7	4.7e-09	341	378	19	54
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 Fe ++yps +e+ LA+++gLt +q+++WF N R + XP_028552550.1 341 FEHflHPYPSDNEKLFLASQTGLTRNQISNWFINARVR 378 564459******************************88 PP
2	BELL	65.9	8.2e-22	223	288	7	72
BELL 7 kkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 ++ +kL +l+ee++kr k y + + ++ sFeav g gsa+ Yt+l ++a+S+hF +L++ i+++i XP_028552550.1 223 NRMNKLFTLQEELEKRQKIYFHRMDELVTSFEAVGGPGSAAAYTALTSRAMSKHFANLRESIINHI 288 6899***********************************************************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 403 aa Download sequence
MVPQELPKEP IGVSEMNNRQ SHPGGICYCS HWNSVDRGLV RPHSLPSSFQ PHDTQIRRSV 60 EPFSVRCKED DFSSFDHIQG HGLSLSLGPE LELEPNNVRP YDYNQAQMVE NVMRNKSLIE 120 LMCEPSCSCA ERLSDDGIIC DQDVDGSIYN SRCSNTKFDN MAPVMSVLQK SPYLKAAQQL 180 LDEAVCVCNF VPEPSSEKDA HRKNQIKENA HTVHLSREEQ EVNRMNKLFT LQEELEKRQK 240 IYFHRMDELV TSFEAVGGPG SAAAYTALTS RAMSKHFANL RESIINHIES SREAFSKDMP 300 KNLKPKRESL QHLGLIHVGQ IWRPLRGLPE DSVMVLRAWL FEHFLHPYPS DNEKLFLASQ 360 TGLTRNQISN WFINARVRLW KPMIEEMYRE EFAEDQGDSN SSP

Sequence ? help Back to Top

Protein Sequence Length: 403 aa Download sequence

MVPQELPKEP IGVSEMNNRQ SHPGGICYCS HWNSVDRGLV RPHSLPSSFQ PHDTQIRRSV  60
EPFSVRCKED DFSSFDHIQG HGLSLSLGPE LELEPNNVRP YDYNQAQMVE NVMRNKSLIE  120
LMCEPSCSCA ERLSDDGIIC DQDVDGSIYN SRCSNTKFDN MAPVMSVLQK SPYLKAAQQL  180
LDEAVCVCNF VPEPSSEKDA HRKNQIKENA HTVHLSREEQ EVNRMNKLFT LQEELEKRQK  240
IYFHRMDELV TSFEAVGGPG SAAAYTALTS RAMSKHFANL RESIINHIES SREAFSKDMP  300
KNLKPKRESL QHLGLIHVGQ IWRPLRGLPE DSVMVLRAWL FEHFLHPYPS DNEKLFLASQ  360
TGLTRNQISN WFINARVRLW KPMIEEMYRE EFAEDQGDSN SSP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G34610.2	3e-65	TALE family protein