PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028551947.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | ERF | ||||||||
Protein Properties | Length: 226aa MW: 25671 Da PI: 9.5808 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 31.4 | 4.7e-10 | 106 | 146 | 1 | 48 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaia 48 + +GV++ k+ +W A I++ +k+++lg+ g+ e+Aa+++++ XP_028551947.1 106 CVMRGVYF--KNMKWQAAIKVD-----KKQIHLGTVGSQEDAARLYDR 146 568***99..47*********4.....5******************95 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 226 aa Download sequence |
MVSLRRRRLL GLCSGKSSIP VELPGSNESS GALNLSRNVN PFSIHPMPLI SISREKPTNI 60 HEISFGSSVV SATSSPKEEI DNYFPGKDMK HRKRYRRKLY EDQEPCVMRG VYFKNMKWQA 120 AIKVDKKQIH LGTVGSQEDA ARLYDRQPNF ELPEEEKHEL SHYNWEEFLA ITRNAINHKK 180 LQRRIGGGRR RKSGIEMRGS DVEEPERGAC GSPSTSDDGE VEVFAS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G13040.2 | 4e-34 | ERF family protein |