PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028551832.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | MYB | ||||||||
Protein Properties | Length: 257aa MW: 29169 Da PI: 7.266 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 45.6 | 1.6e-14 | 13 | 60 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +++W eEde+l++++k+ G g+W+++ + g+ R +k+c++rw+++l XP_028551832.1 13 KLSWRSEEDEILIKYIKRNGLGNWNLVGKNSGLSRDGKSCRLRWLNHL 60 689*******************************************97 PP | |||||||
2 | Myb_DNA-binding | 29.2 | 2.2e-09 | 68 | 107 | 2 | 43 |
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksr 43 +++++ E + + ++ lG++ W+ Iar ++ gRt++++k++ XP_028551832.1 68 LPFSEKEKLVIFSEHAVLGNK-WSDIARQLP-GRTDNEIKNF 107 58999999999999*******.*********.********98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 257 aa Download sequence |
MEARRKGKGI SRKLSWRSEE DEILIKYIKR NGLGNWNLVG KNSGLSRDGK SCRLRWLNHL 60 QPGLKKNLPF SEKEKLVIFS EHAVLGNKWS DIARQLPGRT DNEIKNFMNI HKKKCLKNGV 120 ISIYPPEISM RYTDNGTTEF PKIASSGDHD SVVHQLVELM DLPSIQNTEK DVIDILFSPY 180 LHNPHSSFEL LPQPQLAAAH QSSNTSFNVL SSEQCSNLSI ADLLYSDYSM DGNLDCWLQF 240 ISSSGWEETS SHFSLDC |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G55020.1 | 7e-40 | MYB family protein |