PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028551700.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | ERF | ||||||||
Protein Properties | Length: 332aa MW: 36112.6 Da PI: 4.1095 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 56.5 | 7e-18 | 14 | 62 | 3 | 55 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 y+GVr++ +g+Wv+eIr+p + r r +lg+f ta eAa a+++a+++++g XP_028551700.1 14 YRGVRQRT-WGKWVSEIREP---N-RgNRLWLGTFPTALEAAIAYDQAARAMYG 62 9****999.**********8...2.359***********************998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 332 aa Download sequence |
MRGKGGPENS NFSYRGVRQR TWGKWVSEIR EPNRGNRLWL GTFPTALEAA IAYDQAARAM 60 YGAGARVNFP SDQIGSPDES RITASKLLYG LTATTANCSN VSVDLIAANC SIVSEDLIER 120 RSKEAASDCT PAEPSHVGSS AMTEEIGDMT NAESFDWQDI SLENFDVDEM LRMMDADPGN 180 TGISAEPETV AGLTEETDTD AGGRCTSRTP SAADKLGSLG QMENETNDIC FIYELIKQLN 240 YWPAGDPASF SLGFNDGAEM NAGRHCSSPC HVGMQGTSSH MENETDDTGF IYDFLRQSRQ 300 EPDYWPAGDQ ELFSMGFNDG GRLMNSASDC IN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G75490.1 | 3e-32 | ERF family protein |