PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028551699.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | ERF | ||||||||
Protein Properties | Length: 217aa MW: 24417 Da PI: 4.2137 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 57.4 | 3.6e-18 | 12 | 62 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 + y+GVr++ +g+WvAeIr+p + r r +lg+f ta +Aa a++ a+++++g XP_028551699.1 12 CSYRGVRQRT-WGKWVAEIREP---N-RgNRLWLGTFATALKAAYAYDLAARAMYG 62 67*****999.**********8...2.359***********************998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 217 aa Download sequence |
MRGKGGPENS KCSYRGVRQR TWGKWVAEIR EPNRGNRLWL GTFATALKAA YAYDLAARAM 60 YGPGARLNFS VDQIPSPSES YSSTITTREE TREEANTELN DWLNLTEDLS CENFDVDEML 120 RMMDAEPGNT GITTEPDTED ITHCCSPCHM TSPSTLSFQL QNPDAKLLGA LDHMENETSD 180 TDFSYDFIRP MRQELDYWPP GNPELFDLGF TDGGGLF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G75490.1 | 3e-26 | ERF family protein |