PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028551282.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family WRKY
Protein Properties Length: 111aa    MW: 12795.2 Da    PI: 5.2249
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028551282.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY72.17.3e-232280259
                    --SS-EEEEEEE--TT-.SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY  2 dDgynWrKYGqKevkgs.efprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59
                    +D+y+W KYGqK +kg  +  rsY+rC  ++C +kkkve + ++p++v + Yeg+Hnh+
  XP_028551282.1 22 QDEYEWTKYGQKLIKGIgNKYRSYFRCKKKDCGAKKKVEWAPSNPSTVRVLYEGNHNHQ 80
                    7**************962557*************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 111 aa     Download sequence    
MEMSEEQKGG DDDQIPTITI PQDEYEWTKY GQKLIKGIGN KYRSYFRCKK KDCGAKKKVE  60
WAPSNPSTVR VLYEGNHNHQ CARIDSDEVD EDAMIQANQY DLATQIFGSR N
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G03340.18e-12WRKY family protein