PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_028551280.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
|
||||||||
Family | NAC | ||||||||
Protein Properties | Length: 382aa MW: 43157.8 Da PI: 5.7603 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 91.9 | 1e-28 | 57 | 196 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk....leleevikevd....iykvePwdLpkkvkaeekewyfFskrdkkyatgkrknra.....tksgy 82 lp+G++F+Ptd el+ e+L+ k+ + ++e+i+++d i+ ++P++Lp ++++ ++++fF+++ ++y+tg+rk+r+ +s + XP_028551280.1 57 LPAGVKFDPTDVELL-EHLAGKIGVGIakahIFIDEFIPTLDgeqgICCTHPENLP-GARKDGTSVHFFHRSLNAYSTGNRKRRKicgeaEESVR 149 799************.99**99876653333444445666656666**********.55667899*******************75666555899 PP NAM 83 WkatgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128 W++tgk+k+v++ +g l+g kk++v+y g+ +k+ k++Wv+h+y+l XP_028551280.1 150 WHKTGKTKPVIE-NGILKGWKKIMVLYtsFGKGNKPDKAKWVLHQYHL 196 ************.99************6547888888*********98 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 382 aa Download sequence |
MARAWLTNCR GIAKKVKNAT SYSNYQLCDL GAEANRECPN CQHIIDNSDV SLELPGLPAG 60 VKFDPTDVEL LEHLAGKIGV GIAKAHIFID EFIPTLDGEQ GICCTHPENL PGARKDGTSV 120 HFFHRSLNAY STGNRKRRKI CGEAEESVRW HKTGKTKPVI ENGILKGWKK IMVLYTSFGK 180 GNKPDKAKWV LHQYHLGMDE EEKDGQLVVS KIFFQQTKQM ESNETDENVQ EKPNVLATRY 240 SPRTPKTMTP RPHRSKMNPL YKANEEVPLL LEVQEEQAPE SELPPSTLPT VNLKDEETGS 300 HYWAGESQAI DEPNPQLLNE SFLYHEVLKQ FPPLAESPLQ LHQPDMLIGC KDQFFMYADG 360 FPSLDDIEDL QFSSQDSWLG RL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G25580.1 | 1e-83 | NAC family protein |