PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028551190.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family MYB
Protein Properties Length: 276aa    MW: 31463.2 Da    PI: 9.8442
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028551190.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding57.53e-1872117147
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      rg WT+eEd llv++vk++G + W+ Ia+++  gR +kqc++rw++ 
   XP_028551190.1  72 RGQWTAEEDNLLVRLVKEHGVRKWSQIAKKLV-GRIGKQCRERWHNQ 117
                      89******************************.************96 PP

2Myb_DNA-binding46.67.7e-15126166345
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 
                       W+ eE+  l++a+k+lG++ W+  a++++ gR+++++k+rw+
   XP_028551190.1 126 TWSGEEEISLIQAHKELGNR-WAEMAKKIP-GRSENSIKNRWN 166
                      7*******************.*********.***********8 PP

Sequence ? help Back to Top
Protein Sequence    Length: 276 aa     Download sequence    
MAAVVREEEA AEAGEAMEGR SQERTASDTI KKLKRREKTE QVNKKTGDLF LNVYNSSTVE  60
AKRAKSSGSS VRGQWTAEED NLLVRLVKEH GVRKWSQIAK KLVGRIGKQC RERWHNQLRP  120
GIKEETWSGE EEISLIQAHK ELGNRWAEMA KKIPGRSENS IKNRWNATKR RLSSKRECRS  180
RKTSRGKTSH LQEYIIKTTE VLNNSTATTQ TEASDISFLN CGDYLSVEER FYFMASPPRF  240
HDLFEKEGNA SSTNGSNGEY CTDAFLISMS QDQHVL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G18770.17e-56MYB family protein