PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028551190.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | MYB | ||||||||
Protein Properties | Length: 276aa MW: 31463.2 Da PI: 9.8442 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 57.5 | 3e-18 | 72 | 117 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg WT+eEd llv++vk++G + W+ Ia+++ gR +kqc++rw++ XP_028551190.1 72 RGQWTAEEDNLLVRLVKEHGVRKWSQIAKKLV-GRIGKQCRERWHNQ 117 89******************************.************96 PP | |||||||
2 | Myb_DNA-binding | 46.6 | 7.7e-15 | 126 | 166 | 3 | 45 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 W+ eE+ l++a+k+lG++ W+ a++++ gR+++++k+rw+ XP_028551190.1 126 TWSGEEEISLIQAHKELGNR-WAEMAKKIP-GRSENSIKNRWN 166 7*******************.*********.***********8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 276 aa Download sequence |
MAAVVREEEA AEAGEAMEGR SQERTASDTI KKLKRREKTE QVNKKTGDLF LNVYNSSTVE 60 AKRAKSSGSS VRGQWTAEED NLLVRLVKEH GVRKWSQIAK KLVGRIGKQC RERWHNQLRP 120 GIKEETWSGE EEISLIQAHK ELGNRWAEMA KKIPGRSENS IKNRWNATKR RLSSKRECRS 180 RKTSRGKTSH LQEYIIKTTE VLNNSTATTQ TEASDISFLN CGDYLSVEER FYFMASPPRF 240 HDLFEKEGNA SSTNGSNGEY CTDAFLISMS QDQHVL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G18770.1 | 7e-56 | MYB family protein |