PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028551177.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | NAC | ||||||||
Protein Properties | Length: 205aa MW: 23183.1 Da PI: 8.788 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 145.9 | 2.1e-45 | 6 | 136 | 2 | 128 |
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk.....kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdke 91 pGfrF Pt+eel+++yL++k+++ + ++e+vi+ +d++++ePw+Lp+ +v +++++w+fF+++++++a+g r++r+t++gyWkatg+ + XP_028551177.1 6 LPGFRFYPTEEELLSFYLHNKLNNLRSDMERVIPVADVFSHEPWQLPElsgepCV-QDKEQWFFFCPQQEREASGGRPSRTTTTGYWKATGSPIP 99 59***************************99****************64666433.3677*********************************** PP NAM 92 vlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 ++s++++ g+kkt+vfy+grap+gekt+W m+eyrl XP_028551177.1 100 IYSSTKHRLGMKKTMVFYNGRAPTGEKTKWKMNEYRL 136 ***********************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 205 aa Download sequence |
MSSFQLPGFR FYPTEEELLS FYLHNKLNNL RSDMERVIPV ADVFSHEPWQ LPELSGEPCV 60 QDKEQWFFFC PQQEREASGG RPSRTTTTGY WKATGSPIPI YSSTKHRLGM KKTMVFYNGR 120 APTGEKTKWK MNEYRLFDDH ATTSTAAAAA SALRAEFSLC RLYTGSGSLR SFDRRPPATD 180 DPASTSELRL PEGGATELGK KPRLV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G22380.1 | 6e-69 | NAC family protein |