PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028550689.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | ERF | ||||||||
Protein Properties | Length: 182aa MW: 20153.7 Da PI: 9.6074 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 59.6 | 7.4e-19 | 82 | 130 | 2 | 54 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkle 54 +y+GVr+++ +g+W+AeIrdp+ r r +lg+f+tae+Aa a+++a+ +++ XP_028550689.1 82 KYRGVRRRP-WGKWAAEIRDPR----RgIRKWLGTFDTAEQAASAYDKAAIEFR 130 8********.**********83....46**********************9875 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 182 aa Download sequence |
MELKPSTRRL LSAERENSIL VNSLIHVLSG KHDYAAPAIS FPLADNCKLC RVEGCLGCDF 60 LQESAHGSGE SRKRLCAKKK NKYRGVRRRP WGKWAAEIRD PRRGIRKWLG TFDTAEQAAS 120 AYDKAAIEFR CARDKLNFPI VDQVTVDSSG RSTKSDCSGS GSDDDSAQER GDGAAMKFNQ 180 RG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G34410.1 | 1e-31 | ERF family protein |