PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028550654.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | B3 | ||||||||
Protein Properties | Length: 352aa MW: 41366.4 Da PI: 9.5861 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 42.9 | 8.7e-14 | 40 | 117 | 16 | 99 |
EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS B3 16 lvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 + +p+kfa ++ + + +tl+ ++g W++ l k ++++l++GWkeF ang+ke ++ Fk+ g+s+f +vk+f++ XP_028550654.1 40 MEFPNKFAWKFRVD--LPDLITLKVSNGDLWKICL--FKEENHFYLKDGWKEFIVANGIKEHYSLFFKYAGNSTF--TVKIFDQ 117 66899***999655..6668***************..9999******************************9999..****997 PP | |||||||
2 | B3 | 45.6 | 1.3e-14 | 259 | 350 | 1 | 95 |
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 f kvl++s+ ++ + +p +f+++h + ++k+++l ++ ++W v ++ ++s + + +k W +Fv++n+LkegD++ kl+++s++ + v+ XP_028550654.1 259 FAKVLMKSHLCGQSFMAIPARFVSDHFHA--KPKKIILCKQKQKQWIVSCKCINNSFG-FGGKSWLHFVQDNELKEGDVLFCKLVNSSKGVMDVR 350 89************************866..6779***************87777755.5789*********************99888866665 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 352 aa Download sequence |
MEIRGCWNCK KFEEHYYWNH LEETSLCFMK LMEGDFSLVM EFPNKFAWKF RVDLPDLITL 60 KVSNGDLWKI CLFKEENHFY LKDGWKEFIV ANGIKEHYSL FFKYAGNSTF TVKIFDQTGC 120 FRDTTNFTRY NKNKAYKVYQ RRHRMDVAAP NLKRSRSSTF KIYHSSSLAY YDYKPEQEIP 180 NNNSSDGSFS DEVSYCKRKH RERSDQDVKP SQICQGFDKK HISLYGRLKS KTKEGRENSE 240 DAVKKLKPFY VNETADSSFA KVLMKSHLCG QSFMAIPARF VSDHFHAKPK KIILCKQKQK 300 QWIVSCKCIN NSFGFGGKSW LHFVQDNELK EGDVLFCKLV NSSKGVMDVR IV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G18990.1 | 4e-19 | B3 family protein |