PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028550014.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | FAR1 | ||||||||
Protein Properties | Length: 169aa MW: 20026.3 Da PI: 5.3325 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 70.2 | 4.8e-22 | 73 | 159 | 2 | 89 |
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHel 89 Y++Y++++GFsv+k+++++ ++++ ++ +fvCsk g+++ ++ + +++ +r+ tr+gC ++k + ++ g w+v+k+ ++HnH+l XP_028550014.1 73 AYRKYGYNLGFSVCKDHHSYWPNSRNLKSMDFVCSKAGFKKLHDLN-IQRKYQRSDTRIGCPVMIKFTVDEGGYWKVKKFIENHNHDL 159 59*****************************************999.99999**********************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 169 aa Download sequence |
MPMKMEIDLD LEEDVGYYEQ TIFSQVSEEA DNLENADVQE TSAHESEHVE SVRLDEKFSL 60 SDVYVNEKEA YEAYRKYGYN LGFSVCKDHH SYWPNSRNLK SMDFVCSKAG FKKLHDLNIQ 120 RKYQRSDTRI GCPVMIKFTV DEGGYWKVKK FIENHNHDLP RPEDRHLFR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G38180.1 | 4e-11 | FAR1 family protein |