PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028549365.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | NF-YA | ||||||||
Protein Properties | Length: 230aa MW: 25462.1 Da PI: 10.7471 | ||||||||
Description | NF-YA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | CBFB_NFYA | 99.2 | 4.4e-31 | 87 | 144 | 1 | 58 |
CBFB_NFYA 1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 +ep+YVNaKQy++Il+RRq+Rakle ++k +++ rkpylheSRh hA++R+Rg+gGrF XP_028549365.1 87 EEPIYVNAKQYKAILRRRQHRAKLEFHNKSSKNPRKPYLHESRHLHAMKRARGTGGRF 144 69*******************************************************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 230 aa Download sequence |
MIRQMKKVMN ACMRSLSRVI QNRFYQQGAH NSSMHHKNLI AYLPYAYSDA HYAGVMAAYG 60 SHAAIHPQMM GLSPCSRVAL PHQPAGEEPI YVNAKQYKAI LRRRQHRAKL EFHNKSSKNP 120 RKPYLHESRH LHAMKRARGT GGRFLNTKKI QDASGLHDFA GSEPPQPGRT VGLHNGAAIS 180 SATPTCSEIT SVSNDGGQVV KLHSQAHLGF TYGCDGLFNN GTKLRVPVAR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G54160.1 | 3e-36 | NF-YA family protein |