PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028549364.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | NF-YA | ||||||||
Protein Properties | Length: 231aa MW: 25590.2 Da PI: 10.7471 | ||||||||
Description | NF-YA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | CBFB_NFYA | 99.1 | 4.4e-31 | 88 | 145 | 1 | 58 |
CBFB_NFYA 1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 +ep+YVNaKQy++Il+RRq+Rakle ++k +++ rkpylheSRh hA++R+Rg+gGrF XP_028549364.1 88 EEPIYVNAKQYKAILRRRQHRAKLEFHNKSSKNPRKPYLHESRHLHAMKRARGTGGRF 145 69*******************************************************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 231 aa Download sequence |
MIRQMKKVMN ACMRSLSRVI QNRFYQQGAH NSSMHHKNLI QAYLPYAYSD AHYAGVMAAY 60 GSHAAIHPQM MGLSPCSRVA LPHQPAGEEP IYVNAKQYKA ILRRRQHRAK LEFHNKSSKN 120 PRKPYLHESR HLHAMKRARG TGGRFLNTKK IQDASGLHDF AGSEPPQPGR TVGLHNGAAI 180 SSATPTCSEI TSVSNDGGQV VKLHSQAHLG FTYGCDGLFN NGTKLRVPVA R |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G54160.1 | 4e-36 | NF-YA family protein |