PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028548802.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | Nin-like | ||||||||
Protein Properties | Length: 871aa MW: 96893.5 Da PI: 5.672 | ||||||||
Description | Nin-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | RWP-RK | 89.1 | 3.6e-28 | 572 | 622 | 2 | 52 |
RWP-RK 2 ekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 ek isle l++yF++++kdAAk+Lgvc+T++KriCRq+GI+RWP+Rki+++ XP_028548802.1 572 EKIISLEILQQYFAGSLKDAAKSLGVCPTTMKRICRQHGISRWPSRKINKV 622 789**********************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 871 aa Download sequence |
MSEFVVAEEA DEKCELPPME TIDLVDLDTA PTSDSWNFYS AAAFFSNPPS PLLLSPSLPS 60 RSLSHLAVSF PQPTSPLWIF DDETAEIAGN FDSEKENDNL QIEKIRTFPR TPIKEVSDIS 120 YLIKERMKQA LRYFKEWTNQ RVLVQVWVPV RNGDRYVLTT SEQPFELDRD TNGLLQYRNV 180 SLMYLFSVDE NNDAALGLPG RVFKLKKPEW TPNVQYYSNK EYPRLSHALL YNIRGSLGLP 240 VFDPSRQSCV GVIELIMTSE MVNYAPEVDK VCRALEAVNL KSSEILEHQS IQACDKEHRA 300 ALAELLQILT IVCEAQKLPL AQTWVPCQHG TVLAQHDGSR KSISTSNGIC MGQVCMSTTD 360 AAFYVVEAQM WGFRVACSEH HLQKGQGVVG RAFSVKRPCF CRDVTKFCKM EYPLVHYAQM 420 FGLGSCFALC FGSSHSGDDI YVVEFFLPSD CKDPIKQDAL LESISTLVKH SLRSLKVITG 480 AEVEGLPLGK IDMITYANNE MKQIQYALPK LNTLEDFDEH ENKRIAEHNS PEQHLELSIN 540 SEKNTTLPGK GSITAPAIIT NKVAGRKRGK TEKIISLEIL QQYFAGSLKD AAKSLGVCPT 600 TMKRICRQHG ISRWPSRKIN KVNRSISKLK QVIESVQVAE VALNLNPLVC PLPVAPGSIS 660 FPVHSDSDSI ARDEGTPHFK ALEEPVGGHT SSNTKSSSDG DLKTPVSQGS NDASLGREAC 720 GIEKPFSRNS KQFVSAKDQN TVALFSPANI IVEPEHAVAD ILVEDSASSK LARNTPSTAI 780 SEPKTVIIKA CYKEDIIRFR LAYEAGIVAL NEEIGKRLML EIGTFVIKYL DDDYDWVKLS 840 CEEDLQECLE ISAMSGSSVI RLSIQDVCNE R |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G64530.1 | 0.0 | Nin-like family protein |