PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028548677.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | NAC | ||||||||
Protein Properties | Length: 172aa MW: 19308.8 Da PI: 5.3766 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 55.6 | 1.9e-17 | 3 | 90 | 1 | 84 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvkaeekewy.fFskrdkkya.tgkrknr..atksgyWk 84 lpp+fr hPtdeel+++yL +k+ ++++++ ++i++v+++k+ePwdLp k +++++k y + ++d++ +++ ++r +++++ W XP_028548677.1 3 LPPCFRLHPTDEELITHYLSNKLLNSSFDA-KAIAQVELNKCEPWDLPsKDIEGDSKGEYpCWNEKDTSLLqRQSSQSRedKVDNSKWV 90 79****************************.88***************77787777744426666665544233444442345567775 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 172 aa Download sequence |
MELPPCFRLH PTDEELITHY LSNKLLNSSF DAKAIAQVEL NKCEPWDLPS KDIEGDSKGE 60 YPCWNEKDTS LLQRQSSQSR EDKVDNSKWV IYRVIEKSLS GKEKGAFGLA KIGSLSSMFE 120 EEMTQGERRA RSFYGGNVFR DKFMASAVRN PAETGLVTVA NTDALKLLAL GL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G61430.1 | 2e-20 | NAC family protein |