PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028548490.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | B3 | ||||||||
Protein Properties | Length: 339aa MW: 37265.6 Da PI: 8.4259 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 96.8 | 1.4e-30 | 68 | 171 | 1 | 98 |
EEEE-..-HHHHTT-EE--HHH.HTT....---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-.SS.SE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh....ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkld.gr.se 89 f+kv tpsdv+k++rlv+pk++ae++ ++ + ++ l +ed++g+ W+++++y+++s++yv+tkGW++Fvk+++L++gD+v F + g+ + XP_028548490.1 68 FEKVVTPSDVGKLNRLVIPKQHAEKYfpldSSTHDKGLLLNFEDRNGKPWRFRYSYWNSSQSYVMTKGWSRFVKEKRLDAGDTVSFGRGvGDaAR 162 99***************************9666668899***********************************************955466677 PP E..EEEEE- CS B3 90 felvvkvfr 98 +l++ + r XP_028548490.1 163 DRLFIDWKR 171 777777666 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 339 aa Download sequence |
MEISEARKDS SKCFAEVEEE EHQFLPPVSS TSPSSSSAFV VHWTDGSEPS PSSTTEPAAA 60 TVEKEHMFEK VVTPSDVGKL NRLVIPKQHA EKYFPLDSST HDKGLLLNFE DRNGKPWRFR 120 YSYWNSSQSY VMTKGWSRFV KEKRLDAGDT VSFGRGVGDA ARDRLFIDWK RRPDPHYDPP 180 ASLRIPRFAY HPTASHHPYL PFPRSSTVPW ATSRFFAPSS LATNYLYFRS PQPGPQPDRG 240 PTIPMVLDSF PVGQAKASGA TKRVRLFGVN LEPPRDAEDD TDGAAGLLKL QLRGSLPSHE 300 LRLGGGGGGG SVPSSSSSSS SRGGKDGLII NSPSLDLDM |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G46870.1 | 7e-70 | B3 family protein |