PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028548088.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | B3 | ||||||||
Protein Properties | Length: 186aa MW: 20842.1 Da PI: 9.6478 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 51.7 | 1.6e-16 | 74 | 165 | 1 | 97 |
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE..EE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr.sefelvv 94 f ++ ++s v + +l++pk+f ++ + + ++ l +g++W vk+ + s +++GWk+F+ +n+Lk gD +vF+l+++ +e +l v XP_028548088.1 74 FTSIVVKSQVESPYQLMIPKSFHKSLPNA---TLQVPLV-HQGKTWVVKY--YGESALKRFGTGWKKFALENKLKIGDGCVFELIDDdKELKLGV 162 6788999***************9877544...2245555.59********..777777889************************8878888888 PP EEE CS B3 95 kvf 97 +++ XP_028548088.1 163 QIL 165 876 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 186 aa Download sequence |
MTATTKEDVT VCKILDDEAG GVKGNRTVVV RYTRWSSKVT ATRDYYIQCS DRLKRYAGLP 60 VPISTTPLTG NPYFTSIVVK SQVESPYQLM IPKSFHKSLP NATLQVPLVH QGKTWVVKYY 120 GESALKRFGT GWKKFALENK LKIGDGCVFE LIDDDKELKL GVQILNGQIP LEFIRLGSAE 180 KPINLD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G49480.1 | 2e-07 | B3 family protein |