PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028547980.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | WRKY | ||||||||
Protein Properties | Length: 120aa MW: 13312.7 Da PI: 4.5443 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 54.1 | 3.2e-17 | 1 | 39 | 22 | 59 |
EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 22 rsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 r+YYrC+s+ gCp++k+vers+ dp+++++tY++eHnh+ XP_028547980.1 1 RGYYRCSSSkGCPARKQVERSRADPTMFIVTYSSEHNHP 39 89*****998****************************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 120 aa Download sequence |
RGYYRCSSSK GCPARKQVER SRADPTMFIV TYSSEHNHPW PPVHKKTKPA EEPKPVEPSV 60 AEPASDPEEK FSDLIGEEPS LLIHDDFRWP PSNSSATADE DDGLLYGPLF VGAPLSDDCD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G29280.1 | 1e-22 | WRKY family protein |